Folta Strawberry Project Description

Octoploid strawberries (Fragaria x. ananassa) represent one of the most valued crops in the United States. Despite its economic importance, little is know about the molecular mechanisms that underlie agriculturally-relevant traits, primarily due to a paucity of sequence information. As a first step to remedy this discrepancy a cDNA library has been developed and over 1800 expressed sequence tags (EST's) have been partially sequenced. This information can now be utilized to design SSR's to hasten mapping efforts, develop a basis for interspecies sequence relationships, speed gene discovery, and attribute putative function to genes in strawberry.

July 26, 2004 : Kevin Folta's Strawberry ESTs Analyzed for SSRs

August 6, 2004 : Kevin Folta's Strawberry ESTs Submitted to GenBank

Processing Summary
Number of ESTs sequenced 1847
Number of successful sequences 1505
Average Success Rate 81.5 %
Average Base Count 613
Average Number of HQ Bases 478
Average Phred Quality Value 35
Number of Contigs (CAP3 Assembly, -p 90 -d 60 plus final finishing) 133
Number of Singletons 1171
Number of Putative Unigenes 1304