Fragaria Project Description

Many sequencing projects around the world are depositing ESTs from the genus Fragaria in the NCBI dbEST database. To reduce redundancy and create longer transcripts we assembled these ESTs using the CAP3 program and annotated them through Blast sequence similarity searches, SSR analysis, SNP mining, and other functional characterization. This is the third version of the Fragaria unigene. The CAP3 assembly software was used with a stringency of -p 90. For more information on this project please contact the GDR development team.

August 1, 2006: Genbank Fragaria ESTs Assembled

Processing Summary
Number of ESTs available 19038
Number of ESTs available after filtering 18729
Average Length 636
Number of Contigs (CAP3 Assembly, -p 90 ) 2939
Average Length of Contigs 871
Number of Singlets 7073
Number of Putative Unigenes (contigs and singlets) 10012