Abbott Almond Project Description

Almond (Prunus amygdalus) is one of the major crop species that belong to the Rosaceae, which includes a number of economically important fruit trees.

As a part of the effort to develop an extensive EST database for identification and cloning of genes important to fruit and tree development, we generated 2794 high-quality expressed sequence tags (ESTs) from an almond cDNA library of developing seed. After assembly and annotation, a putative almond unigene set consisting of 734 ESTs was defined. Further annotation includes computational detection of simple sequence repeats (SSR).

The annotation results for Gene Ontology (GO) classification and detection of open reading frame (ORF) will soon be available.

 Processing Summary
 Number of ESTs sequenced  3451
 Number of successful sequences  2794
 Average Success Rate  81 %
 Average Base Count  541
 Average Number of HQ Bases  404
 Average Phred Quality Value  29
 Number of Contigs (CAP3 Assembly -p 95 -d 60 )  145
 Number of Singletons  788
 Number of Putative Unigenes  734