CRA ISF Peach Project Description
Peach (Prunus persica) represents a model species for prunus and a reference species for Rosaceae. To develop an extensive Prunus EST database for identification and cloning of genes important to fruit and tree development, we generated 1667 high-quality expressed sequence tags (ESTs) from a peach cDNA library of developing fruit mesocarp. After assembly and annotation, a putative peach unigene set consisting of 1116 ESTs was defined.
Further annotation includes computational detection of simple sequence repeats (SSR) and open reading frames (ORF).
August 15, 2005 : CRA ISF Peach ESTs Analyzed for SSRs
August 30, 2005 : CRA ISF Peach ESTs Submitted to GenBank
| Processing Summary | |
| Number of ESTs sequenced | 1907 | Number of successful sequences | 1667 | Average Success Rate | 87.4% | Average Base Count | 573 | Average Number of HQ Bases | 443 | Average Phred Quality Value | 37 | Number of Contigs (CAP3 Assembly -p 90 -d 60 ) | 233 | Number of Singletons | 883 | Number of Putative Unigenes | 1116 |
