Rosa Assembly Project Description
Many sequencing projects around the world are depositing ESTs from the genus Malus in the NCBI dbEST database. To reduce redundancy and create longer transcripts we assembled these ESTs using the CAP3 program and are in the process of annotating them through homology to SwissProt, Arabidopsis, and NCBI nr proteins. This is the second version of the Malus unigene.
For more information on this project please contact the GDR development team.
December 19, 2005: Genbank Rosa ESTs Assembled
| Processing Summary | |
| Number of ESTs available | 5305 | Number of ESTs available after filtering | 5289 | Average Length | 495.9 | Number of Contigs (CAP3 Assembly, -p 90 ) | 705 | Average Length of Contigs | 655.5 | Number of Singlets | 2258 | Number of Putative Unigenes | 2963 |
