Jung, S., Lee, T., Cheng, CH., Humann, J., Yu, J., Ficklin, S.P. and Main, D. (2017). Extension modules for storage, visualization and querying of genomic, genetic and breeding data in Tripal databases. Database (Oxford) bax092

Iezzoni A., Peace, C., Main, D., Bassil, N., Coe, M., Finn, C., Gasic, K., Luby, J., Hokanson, S., McFerson, J., Norelli, J., Olmstead, M., Whitaker, V., Yue, C. (2017). RosBREED 2: Progress and future plans to enable DNA-informed breeding in the Rosaceae. Acta Hortic.2017.1172.20.

Gasic, K., Jung, S., Cheng, C.H., Lee, T., Zheng, P., Yu, J., Humann, J., Evans, K., Peace, C., DeVetter, L., Mcferson, J., Coe, M.I. and Main, D. (2017). Resources in the Genome Database for Rosaceae for Peach Research. Acta Horticulturae (in press).

Ma, Y., Coyne, C.J., Main, D. et al. (2017) Development and validation of breeder-friendly KASPar markers for er1, a powdery mildew resistance gene in pea (Pisum sativum L.). Molecular Breeding 37: 151. 

Ma Y, Coyne CJ, Grusack M, Mazourek M, Cheng P, Main D, McGee R. (2017) Genome-wide SNP identification, linkage map construction and QTL mapping for seed mineral concentrations and contents in pea (Pisum sativum L.) BMC Plant Biology  17 (1), 43

Yu, L.X., Zheng, P., Zhang, T., Rodringuez, J., Main, D. (2017) Genotyping‐by‐sequencing‐based genome‐wide association studies on Verticillium wilt resistance in autotetraploid alfalfa (Medicago sativa L.). Molecular Plant Pathology 18 (2), 187-194.

Jung S, Lee T, Yu J Ficklin SP, Main D (2016) Chado use case: storing genomic, genetic and breeding data of Rosaceae and Gossypium crops in Chado. Database (Oxford) baw010  

Shin SS, Zheng P, Fazio G, Mazzola M, Main D, Zhu Y (2016) Transcriptome changes specifically associated with apple (Malus domestica) root defense response during Pythium ultimum infection. Physiological and Molecular Plant Pathology 94:16-26

Ru,. S, Hardner, C., Carter, P., Evans, K., Main, D., Peace, C. (2016) Modeling of genetic gain from marker-assisted seedling selection in clonally propagated crops. Horticulture Research (Online) 3, 16015

Xu, J., Yu. J., Kohel, R., Percy, R., Beavis, W., Main, D., Yu, J. 2015. Distribution and evolution of cotton fiber development genes in the fibreless G. raimondii genome. Genomics 106:61-69.